@prefix ex:<https://purl.expasy.org/sparql-examples/neXtProt/> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix schema: <https://schema.org/> .
@prefix sh: <http://www.w3.org/ns/shacl#> .

ex:NXQ_00057 a sh:SPARQLExecutable,
        sh:SPARQLSelectExecutable ;
    rdfs:comment "Proteins that are located in the mitochondrion with an experimental evidence originating not from HPA or DKFZ-GFP"@en ;
    sh:prefixes _:sparql_examples_prefixes ;
    sh:select """PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>
PREFIX source: <http://nextprot.org/rdf/source/>

SELECT DISTINCT ?entry WHERE {
 values ?mitoloc {nextprot_cv:SL-0173 nextprot_cv:GO_0005739} # SL and GO values for mitochondrion

 ?entry :isoform ?iso.
 ?iso :cellularComponent ?loc.
 ?loc :term /:childOf ?mitoloc.
 filter not exists { ?loc :negativeEvidence ?negev. } # No negative localization evidence
 ?loc :evidence /:assignedBy ?src.
 filter ( ?src not in (source:Human_protein_atlas, source:GFP-cDNAEMBL))
}""" ;
    schema:keywords "method",
        "subcellular location",
        "tutorial" ;
    schema:target <https://sparql.nextprot.org/sparql> .

