NXQ_00235

rq turtle/ttl

• antibody
• expression
• method
• tutorial

Proteins with at least two antibodies available from Human Protein Atlas that have associated tissue expression annotations from immunohistochemistry studies

Use at

• https://sparql.nextprot.org/sparql

PREFIX : <http://nextprot.org/rdf/>
PREFIX nextprot_cv: <http://nextprot.org/rdf/terminology/>

SELECT DISTINCT ?entry WHERE {
 ?entry :isoform ?iso.
 ?iso :antibodyMapping ?abmap.
 ?abmap :evidence / :reference / :accession ?aid .
 ?iso :expressionProfile / :evidence ?ev .
 ?ev :evidenceCode nextprot_cv:ECO_0001055.
# ?ev :quality :GOLD .
}
group by ?entry having(count(distinct ?aid) > 1)
order by ?entry

graph TD
classDef projected fill:lightgreen;
classDef literal fill:orange;
classDef iri fill:yellow;
  v6("?_anon_2f42516dd8204678bde772a557fbb2253663")
  v3("?abmap")
  v4("?aid")
  v1("?entry"):::projected 
  v5("?ev")
  v2("?iso")
  a2((" "))
  a3((" "))
  a4((" "))
  a1((" "))
  c9([":terminology/ECO_0001055"]):::iri 
  f0[[" > '1^^xsd:integer'"]]
  f0 --> a1
  v1 --":isoform"-->  v2
  v2 --":antibodyMapping"-->  v3
  v3 --":evidence"-->  a2
  a2 --":reference"-->  a3
  a3 --":accession"-->  v4
  v2 --":expressionProfile"-->  a4
  a4 --":evidence"-->  v5
  v5 --":evidenceCode"-->  c9
  bind2[/"count(?aid)"/]
  v4 --o bind2
  bind2 --as--o v6